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Select item 92836911.

Pan-phylum In Silico Analyses of Nematode Endocannabinoid Signalling Systems Highlight Novel Opportunities for Parasite Drug Target Discovery

Bethany A. Crooks, Darrin Mckenzie, Luke C. Cadd, Ciaran J. McCoy, Paul McVeigh, Nikki J. Marks, Aaron G. Maule, Angela Mousley, Louise E. Atkinson

Front Endocrinol (Lausanne) 2022; 13: 892758. Published online 2022 Jul 1. doi: 10.3389/fendo.2022.892758

PMCID:: PMC9283691

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Use of universal primers for the 18S ribosomal RNA gene and whole soil DNAs to reveal the taxonomic structures of soil nematodes by high-throughput amplicon sequencing

Harutaro Kenmotsu, Emi Takabayashi, Akinori Takase, Yuu Hirose, Toshihiko Eki

PLoS One. 2021; 16(11): e0259842. Published online 2021 Nov 15. doi: 10.1371/journal.pone.0259842

PMCID:: PMC8592498

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Advances in our understanding of nematode ion channels as potential anthelmintic targets

Shivani Choudhary, Sudhanva S. Kashyap, Richard J. Martin, Alan P. Robertson

Int J Parasitol Drugs Drug Resist. 2022 Apr; 18: 52–86. Published online 2021 Dec 25. doi: 10.1016/j.ijpddr.2021.12.001

PMCID:: PMC8841521

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DNA Polymerase Diversity Reveals Multiple Incursions of Polintons During Nematode Evolution

Dae-Eun Jeong, Sameer Sundrani, Richard Nelson Hall, Mart Krupovic, Eugene V Koonin, Andrew Z Fire

Mol Biol Evol. 2023 Dec; 40(12): msad274. Published online 2023 Dec 9. doi: 10.1093/molbev/msad274

PMCID:: PMC10748475

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Select item 76943395.

Speciation and adaptive evolution reshape antioxidant enzymatic system diversity across the phylum Nematoda

Lian Xu, Jian Yang, Meng Xu, Dai Shan, Zhongdao Wu, Dongjuan Yuan

BMC Biol. 2020; 18: 181. Published online 2020 Nov 26. doi: 10.1186/s12915-020-00896-z

PMCID:: PMC7694339

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Pan-Nematoda Transcriptomic Elucidation of Essential Intestinal Functions and Therapeutic Targets With Broad Potential

Qi Wang, Bruce A. Rosa, Douglas P. Jasmer, Makedonka Mitreva

EBioMedicine. 2015 Sep; 2(9): 1079–1089. Published online 2015 Jul 29. doi: 10.1016/j.ebiom.2015.07.030

PMCID:: PMC4587998

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Moving towards a complete molecular framework of the Nematoda: a focus on the Enoplida and early-branching clades

Holly M Bik, P John D Lambshead, W Kelley Thomas, David H Lunt

BMC Evol Biol. 2010; 10: 353. Published online 2010 Nov 12. doi: 10.1186/1471-2148-10-353

PMCID:: PMC2995457

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Improved phylogenomic sampling of free-living nematodes enhances resolution of higher-level nematode phylogeny

Ashleigh B. Smythe, Oleksandr Holovachov, Kevin M. Kocot

BMC Evol Biol. 2019; 19: 121. Published online 2019 Jun 13. doi: 10.1186/s12862-019-1444-x

PMCID:: PMC6567515

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Disparate gain and loss of parasitic abilities among nematode lineages

Martijn Holterman, Akbar Karegar, Paul Mooijman, Hanny van Megen, Sven van den Elsen, Mariette T. W. Vervoort, Casper W. Quist, Gerrit Karssen, Wilfrida Decraemer, Charles H. Opperman, David M. Bird, Jan Kammenga, Aska Goverse, Geert Smant, Johannes Helder

PLoS One. 2017; 12(9): e0185445. Published online 2017 Sep 21. doi: 10.1371/journal.pone.0185445

PMCID:: PMC5608397

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Taxonomic profiling of individual nematodes isolated from copse soils using deep amplicon sequencing of four distinct regions of the 18S ribosomal RNA gene

Harutaro Kenmotsu, Kiichi Uchida, Yuu Hirose, Toshihiko Eki

PLoS One. 2020; 15(10): e0240336. Published online 2020 Oct 7. doi: 10.1371/journal.pone.0240336

PMCID:: PMC7540906

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Molecular Characterization and Development of Real-Time PCR Assay for Pine-Wood Nematode Bursaphelenchus xylophilus (Nematoda: Parasitaphelenchidae)

Weimin Ye, Robin M. Giblin-Davis

PLoS One. 2013; 8(11): e78804. Published online 2013 Nov 11. doi: 10.1371/journal.pone.0078804

PMCID:: PMC3823978

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Signatures of adaptation to plant parasitism in nematode genomes

DAVID McK. BIRD, JOHN T. JONES, CHARLES H. OPPERMAN, TAISEI KIKUCHI, ETIENNE G. J. DANCHIN

Parasitology. 2015 Feb; 142(Suppl 1): S71–S84. Published online 2014 Jan 30. doi: 10.1017/S0031182013002163

PMCID:: PMC4413825

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The evolution of parasitism in Nematoda

MARK BLAXTER, GEORGIOS KOUTSOVOULOS

Parasitology. 2015 Feb; 142(Suppl 1): S26–S39. Published online 2014 Jun 25. doi: 10.1017/S0031182014000791

PMCID:: PMC4413787

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Influence of ecological and edaphic factors on biodiversity of soil nematodes

Rawhat Un Nisa, Aadil Yousuf Tantray, Nazia Kouser, Kaisar Ahmad Allie, Shaheen Majeed Wani, Saud A. Alamri, Mohammed Nasser Alyemeni, Leonard Wijaya, Ali Asghar Shah

Saudi J Biol Sci. 2021 May; 28(5): 3049–3059. Published online 2021 Feb 24. doi: 10.1016/j.sjbs.2021.02.046

PMCID:: PMC8117023

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Integrative Taxonomy and Molecular Phylogeny of the Plant-Parasitic Nematode Genus Paratylenchus (Nematoda: Paratylenchinae): Linking Species with Molecular Barcodes

Phougeishangbam Rolish Singh, Gerrit Karssen, Marjolein Couvreur, Sergei A. Subbotin, Wim Bert

Plants (Basel) 2021 Feb; 10(2): 408. Published online 2021 Feb 22. doi: 10.3390/plants10020408

PMCID:: PMC7926417

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Select item 690000616.

Reduced tillage, but not organic matter input, increased nematode diversity and food web stability in European long‐term field experiments

Giulia Bongiorno, Natacha Bodenhausen, Else K. Bünemann, Lijbert Brussaard, Stefan Geisen, Paul Mäder, Casper W. Quist, Jean‐Claude Walser, Ron G. M. de Goede

Mol Ecol. 2019 Nov; 28(22): 4987–5005. Published online 2019 Oct 31. doi: 10.1111/mec.15270

Correction in:: Mol Ecol. 2021 Feb; 30(3): 874–875.

PMCID:: PMC6900006

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Incidence of Oscheius onirici (Nematoda: Rhabditidae), a potentially entomopathogenic nematode from the marshlands of Wisconsin, USA

Weimin Ye, Shane Foye, Ann E. MacGuidwin, Shawn Steffan

J Nematol. 2018 May; 50(1): 9–26. Published online 2018 May 31. doi: 10.21307/jofnem-2018-004

PMCID:: PMC6909328

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Select item 650552618.

Chemosynthetic ectosymbionts associated with a shallow-water marine nematode

Laure Bellec, Marie-Anne Cambon Bonavita, Stéphane Hourdez, Mohamed Jebbar, Aurélie Tasiemski, Lucile Durand, Nicolas Gayet, Daniela Zeppilli

Sci Rep. 2019; 9: 7019. Published online 2019 May 7. doi: 10.1038/s41598-019-43517-8

PMCID:: PMC6505526

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Select item 243250019.

On the Extent and Origins of Genic Novelty in the Phylum Nematoda

James Wasmuth, Ralf Schmid, Ann Hedley, Mark Blaxter

PLoS Negl Trop Dis. 2008 Jul; 2(7): e258. Published online 2008 Jul 2. doi: 10.1371/journal.pntd.0000258

PMCID:: PMC2432500

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Select item 682686720.

Genomic Analyses Identify Novel Molecular Signatures Specific for the Caenorhabditis and other Nematode Taxa Providing Novel Means for Genetic and Biochemical Studies

Bijendra Khadka, Tonuka Chatterjee, Bhagwati P. Gupta, Radhey S. Gupta

Genes (Basel) 2019 Oct; 10(10): 739. Published online 2019 Sep 24. doi: 10.3390/genes10100739

PMCID:: PMC6826867

Article PDF–6.8M

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Figure 6

Histochemical GUS analysis of transgenic Arabidopsis lines harboring nematode-responsive root-specific promoters. (A) Control plant (w/o nematode infection) plant (left) and nematode infected plant (right) at 21 dpi. (B) Control (w/o nematode infection) root of transgenic (pAt1g74770::GUS) plant. (C) Nematode infected root of transgenic (pAt1g74770::GUS) plant exhibiting strong GUS activity throughout the root at 21 dpi. (D) Enlarged microscopic view of nematode infected root of transgenic (pAt1g74770::GUS) plant exhibiting strong GUS activity and multiple galls at 21 dpi. (E) Control (w/o nematode infection) transgenic plant (pAt2g18140::GUS). (F) Nematode infected transgenic plant (pAt2g18140::GUS) showing GUS activity at 10 dpi. (G) Control (w/o nematode infection) root of transgenic (pAt2g18140::GUS) plant. (H) Nematode infected root of transgenic (pAt2g18140::GUS) plant exhibiting GUS activity only in the nematode induced galls at 10 dpi. (I) Enlarged microscopic view of galls from nematode infected roots of transgenic (pAt2g18140::GUS) plant showing GUS activity at 10 dpi. The red arrow in (D,H) and (I) point to the nematode galls.

Identification, Validation and Utilization of Novel Nematode-Responsive Root-Specific Promoters in Arabidopsis for Inducing Host-Delivered RNAi Mediated Root-Knot Nematode Resistance

Front Plant Sci. 2017;8:2049.
Figure 6

Relationships between diversity indices of nematodes and total nematode energy flux. (a) Shannon’s diversity index of nematodes and total nematode energy flux. (b) Nematode evenness and total nematode energy flux. (c) Nematode richness and total nematode energy flux. (d). Nematode dominance and total nematode energy flux.

Exotic earthworms maintain soil biodiversity by altering bottom-up effects of plants on the composition of soil microbial groups and nematode communities

Biol Fertil Soils. ;55(4):213-227.
Figure 1

The penetration of S. abbasi to the hemocoel of the 4th instar larva of Ae. albopictus at 10 min after inoculation. (a) Nematode in the midgut of the 4th instar larva of Ae. albopictus. gc: gastric caecum, Mg: midgut. Arrow head: S. abbasi. (b) Nematode in the gastric caecum of the 4th instar larva of Ae. albopictus. (c) Nematode penetrated by its head from gastric caecum to the hemocoel of the 4th instar larva of Ae. albopictus. (d) Nematode penetrated by its tail from gastric caecum to the hemocoel of the 4th instar larva of Ae. albopictus. N: S. abbasi, Nh: nematode head, Nt: nematode tail, gc: gastric caecum, Tr: tracheae.

The Invasion and Encapsulation of the Entomopathogenic Nematode, Steinernema abbasi, in Aedes albopictus (Diptera: Culicidae) Larvae

Insects. 2020 Dec;11(12):832.
FIGURE 6

Fluorescence micrographs of B. xylophilus after RNAi. (A) Morphology of nematode soaked in UGT440A1 dsRNA. (B) The red fluorescence indicates the Cy3-labeled UGT440A1 dsRNA entry into the nematode. (C) Morphology of nematode soaked in gfp dsRNA. (D) The red fluorescence indicates the Cy3-labeled gfp dsRNA entry into the nematode. (E) Morphology of nematode soaked in sterilized water. (F) No fluorescence was detected in the nematode soaked in sterilized water. m, metacorpus; an, anus. Scale bar = 50 μm.

UGT440A1 Is Associated With Motility, Reproduction, and Pathogenicity of the Plant-Parasitic Nematode Bursaphelenchus xylophilus

Front Plant Sci. 2022;13:862594.